Installation

Requirements

Snakecdysis requires and a snakemake workflow to wrapped.

Some wrapped workflow exemples:

• https://culebront-pipeline.readthedocs.io/

• https://rattlesnp.readthedocs.io

• https://podiumasm.readthedocs.io/en/latest/

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Install Snakecdysis PyPI package

First, install the Snakecdysis python package with pip.

python3 -m pip install snakecdysis

Now, follow this documentation to wrapped command line of your favorite workflow !!!!